PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0681.5.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 154aa    MW: 17931.4 Da    PI: 10.3614
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0681.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP233.69.9e-114989451
                  AP2  4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
                         + V++  k+ +W A I++      +k+++lg+ gt eeAa ++++a+ 
  Kaladp0040s0681.5.p 49 RVVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAAHLYDRAAY 89
                         77887..47*********4.....5********************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541718.5E-85092IPR016177DNA-binding domain
SMARTSM003800.001250104IPR001471AP2/ERF domain
PfamPF008471.6E-45490IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.9E-75594IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    Send to blast
MKDDFRPSLN HLSASSLTKE QPAPPISEFK RRKRHKRKQI QDQETCLMRV VYFKNMKWQA  60
AIKVDKKQIH LGTVGTQEEA AHLYDRAAYM CGREPNFELS EVEKQELKQL NWDEFLEITR  120
STITSKKHQR RGIVSSRRRS VLSSQHSSSM DGE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13038RRKRHKRKQ
23138RKRHKRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001151501.13e-54DNA binding protein
RefseqXP_008645698.13e-54PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
SwissprotQ56XP91e-43ERFL1_ARATH; Ethylene-responsive transcription factor-like protein At4g13040
TrEMBLC0P9B03e-54C0P9B0_MAIZE; Uncharacterized protein
STRINGGSMUA_Achr6P06510_0019e-53(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.13e-44ERF family protein